FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007948947

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948947
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457188
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28900.6321250776485823No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22870.5002318521046047No Hit
ATGTCCAACATGGACATCGATGGTATTAACA9130.19969902972081505No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5460.11942570671146224No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5310.1161447807029056No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5270.11526986710062381No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5040.11023911388750361No Hit
CGTATGCCGACTACTAGCACCGCTTCCCAGA4620.10105252106354498No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)