FastQCFastQC Report
Sun 21 May 2023
EGAF00007948951

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948951
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448455
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22920.5110880690370271No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13400.29880367037941374No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7560.16857878716928118No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7330.16345006745381363No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7170.15988226243435796No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5850.13044787102384853No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5370.11974445596548149No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)