FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007948969

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007948969
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences459067
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9140.19909947785399515No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8440.1838511589811509No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG8150.1775339983052583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)