FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007949025

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949025
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499375
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30550.611764705882353No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16850.33742177722152694No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9090.18202753441802252No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7520.15058823529411766No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6650.13316645807259075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)