FastQCFastQC Report
Sun 21 May 2023
EGAF00007949027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464718
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67161.4451775054979579No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17260.37140803670182776No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7800.16784372458135902No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6780.14589492982841207No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5480.1179209757315189No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)