FastQCFastQC Report
Sun 21 May 2023
EGAF00007949033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949033
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences436878
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61171.4001620589729857No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15540.3557057118921072No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG12710.29092790206876973No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8760.20051364454149673No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8410.19250225463401682No Hit
CAGCGCGGTGATCCGTTCGACAAAAACTACG4530.10369027508823975No Hit
GCGAAAACTGCGGCGGCCAAACCGGCTGCCA4370.10002792541624891No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)