FastQCFastQC Report
Sun 21 May 2023
EGAF00007949039

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949039
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences470074
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG68861.4648757429681283No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7540.16040027740313229No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6990.1486999919161664No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6020.12806494296642656No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG4920.10466437199249481No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)