FastQCFastQC Report
Sun 21 May 2023
EGAF00007949057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences453183
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG63721.4060545077816247No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7920.17476383712539967No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5300.1169505475712902No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5140.1134199650031003No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4890.10790342974030358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)