FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007949097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472716
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46430.9821964985318881No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12370.2616793169683277No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7820.1654270217212872No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7580.16034997757638836No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5620.11888745039304785No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5090.10767564457306289No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)