FastQCFastQC Report
Wed 31 May 2023
EGAF00007949135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417830
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10550.25249503386544764No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10150.24292176243926955No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6690.1601129646028289No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6340.15173635210492306No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5360.1282818371107867No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5310.1270851781825144No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4390.10506665390230475No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4370.10458799033099585No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG4300.10291266783141469No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)