FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007949137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences400610
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11060.27607897955617683No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7340.18322058860238138No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7230.18047477596665085No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC6050.1510196949651781No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5920.14777464366840568No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5820.14527845036319612No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)