FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007949249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44631708
Sequences flagged as poor quality0
Sequence length125
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG923240.20685742073774097Illumina Single End PCR Primer 1 (100% over 50bp)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN461020.1032942767953223No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)