FastQCFastQC Report
Sat 18 Mar 2023
EGAF00007949403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99256941
Sequences flagged as poor quality0
Sequence length125
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG3069270.30922472212799706Illumina Single End PCR Primer 1 (100% over 50bp)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1200550.12095375778304511No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)