FastQCFastQC Report
Sat 18 Mar 2023
EGAF00007949486

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949486
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80753378
Sequences flagged as poor quality0
Sequence length125
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGCTGATCATCTCGTAT1301970.1612279303040425TruSeq Adapter, Index 2 (97% over 38bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)