FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007949862

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007949862
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20802744
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGCTTCAATCGGGAGTACTACTCGATTGTCAACGTCAAGGAGTCGCA435500.20934738224918792No Hit
GGCCAATTGATTTGATGGTAAGGGAGGGATCGTTGACCTCGTCTGTTATG339000.162959271142307No Hit
GGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTTTCAGGGT328980.15814259888022464No Hit
GGGGGAAGTATGTAGGAGTTGAAGATTAGTCCGCCGTAGTCGGTGTACTC272860.13116538856604687No Hit
GGGCAGGATAGTTCAGACGGTTTCTATTTCCTGAGCGTCTGAGATGTTAG226980.10911060579315883No Hit
GGTTGGTGTAAATGAGTGAGGCAGGAGTCCGAGGAGGTTAGTTGTGGCAA217050.10433719705438858No Hit
GGGACGATTAGTTTTAGCATTGGAGTAGGTTTAGGTTATGTACGTAGTCT208240.10010217882794692No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)