FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454185
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41270.9086605678302894No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA20390.4489360062529586No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9100.20035888459548423No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8100.17834142474982662No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6740.14839767935973228No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6530.14377401279214416No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG6530.14377401279214416No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5640.1241784735295089No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5390.1186741085680945No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG5120.11272939440976695No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)