FastQCFastQC Report
Sun 21 May 2023
EGAF00007951202

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951202
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417818
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGGCAGAACCGTGGTGGTTACGGGATGCGCTACCAGAATGGC40820.9769804077373401No Hit
AGGGTGGGTCTTCGGGGTCGGCCACGGCAGTTTACGCGGTTTTT17900.4284162003551786No Hit
TACACCGACACGGGAACCGCGACCTTTAACCGGGGATGGCGGAG16860.40352497977588325No Hit
TTTCAGGGACGGTACGCCGACACGAGAACCGCGACCTTTAACTG15690.3755223566241761No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG14010.33531346184223754No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA13360.31975644898017797No Hit
CGGATGAGTTTTCGGAGTCGGCCACGGCAGTTTACGCGGCTTCT13330.3190384330019291No Hit
AACGGTTACGCTGCTCTGTTCAGACGGACCCGGGCGTTCCGGGG13180.31544835311068453No Hit
TGGTGCCTGAGACTCGTTCAGTTTCTTAGCTTCGCCCAGGACGT13130.31425165981360303No Hit
TTTCTGCAGGATGTTCTGTACCGCGTCGGACGGGGTTTTGGCAC12590.30132737220512285No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA12030.28792440727780994No Hit
GACGCTGCTCTGTTCAGACGGACCCGGACGTTCAGGGGTGGACT11640.27859019956057424No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG11360.2718887170969178No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC10230.2448434485828758No Hit
CGGGTGGGTTTTCGGGGTCGGCCAAGGCAGTTTACGCGGCTTTT10170.24340741662637802No Hit
GGCCGGCTTTTTCGGTGGCTGAACTGGCGGTTTCGGAGCACCCG10040.24029601405396606No Hit
AACGGTGACGCTAGACTGTTCGGAAGGACCCGGACGTTCTGGAG9580.22928643572081622No Hit
GCGAGTCTGATCGGTGATAACATAACGAGTTTCGATCATATCTT9520.22785040376431842No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT9230.22090958264124572No Hit
ACCCTGAACTGGGGTAGAGGTTACAGTTTGCGCACGAGCAGAGG8070.19314629814895481No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG7850.1878808476417962No Hit
GATGCTGGAAATGTTGGAGCGAGATTTAACCAGGGTAACAGAGC7830.18740217032296358No Hit
GATTTCCGGGGTTTTGACAGAACGCAGCAGGTCAGCGATGGCCG7800.1866841543447147No Hit
GGTGCCGTTTGCTTTGGCGATGTCGTTTACGGTATCACCCGGTT7580.18141870383755607No Hit
GTCAGACGGACGAGTTGGCAGGGTTGCGCCGGTTTCGTTTGCGG7570.18117936517813976No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCAGTG7310.17495656003331594No Hit
GGATGCGGACGCAGTGGTAGCACGAGACTGACGCGGGGCGGTAG6930.1658616909754965No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT6790.1625109497436683No Hit
TTCCGGCAGAACCGGCCACAGTACGCAAGGCAGCGGAGCCTGGG6690.1601175631495053No Hit
TTTAACCGCCTGATATTCAGTCAGGCCCAGACGGCGTTTGTTGG6670.1596388858306727No Hit
AACGCAGGCACCGCGACGACGACGGGACGGTGGTGGGGTCGGTT6350.15198004872935106No Hit
CACGCTAGACTGCTCGGACGGACCTGGACGTTCTGGGGTAGACT6330.15150137141051848No Hit
AACGCTAGACTGTTCGCTCGGACCAGGACGTTCTGGAGTGGACT6330.15150137141051848No Hit
TACAGACGCGGAGATCATCTGGCGAATCTTCTCCTGCGGGTCGC6330.15150137141051848No Hit
GTAAGCGCCCTGGGTGGTCTGCATGATAGCACCCGCTTTCGGGG6280.15030467811343695No Hit
CAGAGAGCTTTCCAGTTTGATCAGTTCTGCAATGCCATCGTTCA6260.14982600079460434No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6240.14934732347577176No Hit
AGACGGCGGCGGGGTAGGTTTGACCGGAACTGGTTTCGGCACTG6070.14527856626569463No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATTGGC6050.14479988894686202No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC6000.14360319564978052No Hit
GTCACCCGGAACGACCTGGCTGGTGTGGCCAGTTTCTGCTGCGG5940.14216716369328272No Hit
AGTTTCGCTACCGTTGAAGTGCATGTAGGTGGTGCGGGTTTCCA5790.13857708380203823No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGTGGA5490.1313969240195492No Hit
CAGTTCTTTCTCCAGTTTAATCAGTTCCGCGATGCCGTCGTGCA5430.12996089206305136No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG5350.12804618278772095No Hit
CGGGGTGTTACCACCGATCGTCAGAGTATCGGAGACTTTCGCAG5320.12732816680947207No Hit
GATGGTGGATTCGCTACGGGAACGGCGCTGCACAACGTGACGGG5260.12589213485297426No Hit
TGCGTCTTCGAAATCCTCGTCATCGTCATCTTCTTCTTCACGCA5190.12421676423706016No Hit
AGCCGGCTTTTTCGGCGGCTGAACAGGTGGTTTCGGGGCACCCG5150.12325940959939496No Hit
CATGATGCTAGAGCTCACGTTTTCGTTCTCACCACGATAGCGTT5120.12254139362114604No Hit
TCACATAGATTTTTCAATCTTGATCAGTTCCAGGATACCGTCCT5110.12230205496172974No Hit
CAGAGATTTTTCAATCTTGATCAGTTCCGCGATACCGTCGTACA4980.11919065238931784No Hit
TGACCTATTTAAATACGAGCCTCAGTCAGACGGACGAGTCGGCA4970.11895131372990153No Hit
CGGTTTATTGCCATCTTCCTTACCCGGTTTGTTGCCATCCTCTT4890.11703660445457112No Hit
GATGGTGGATTCGGAACGGCTACGACGCTGAACGACGTGGCGGG4860.11631858847632223No Hit
AGACGCTAGATGAGGAGCGTACGGAGCTGAACACAGATTTAAAT4710.11272850858507773No Hit
AGGTCACTGCATTTCTTTTTCAATTTTGATCAGCTCCAGGATAC4620.11057446065033101No Hit
TTTGGAGGTGAACGGTTTACCTTTATCCGGCAGGTCTGCCATCG4560.1091384286938332No Hit
GTTCAGTACATAGCAGCTGCTAGCCCACAGCAGCTGGGATTTGG4530.1084204127155843No Hit
AGTGATAACGTAACGGGTTTCGATCATGTCTTCCGGCTGCACGG4520.108181074056168No Hit
TACCTGGATGTCCAGATCGAAGTAGAAACGGCGTGCCATGGCCG4520.108181074056168No Hit
CAGAGATTTCTCCATCTTAATCAGTTCGATGATGCCGTCCTGCA4470.10698438075908648No Hit
CAGTTCGATAATGCCGTCCTGCATTTCCTTCACTGCCTGGTATT4430.10602702612142129No Hit
CACCTGACCATTGGCGTGAGTGGTAACGTTGTAGGCGTTAGTTT4400.1053090101431724No Hit
TGGGGTACCGGATACCTGTTTTTCCAGGCGACCCTGAACCGGAG4390.1050696714837561No Hit
CAGACCCATTGGTTCGTTCATGATGTCGTTGTCCAGGCCCGGAC4340.10387297818667458No Hit
GCCACGGCTCAGCTGAGAGCGGATTTTACGGTACTGGCCAGAAC4310.10315496220842568No Hit
GTTCAGGTCGTTTGCCAGAGCAAAGGTAATGTTTTTACCGTCAC4270.10219760757076046No Hit
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG4250.10171893025192787No Hit
AACCCTCTTAACCGCTGTATCGGCGAGAAGCTCTTCTGAGGGGC4220.10100091427367897No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)