FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences579973
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16590.2860477987768396No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10590.1825947069949808No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9670.16673189958842913No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7560.1303508956451421No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6020.10379793542113168No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)