FastQCFastQC Report
Sun 21 May 2023
EGAF00007951237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences530528
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG29530.5566152964593762No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC28580.5387086072742626No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC21210.3997903974908016No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT19530.3681238313529163No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA18530.3492746848422703No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG18210.3432429579588636No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17630.3323104529826889No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG17590.3315564871222631No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT16470.31044544303033955No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG14210.26784637191627964No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG13960.26313408528861815No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG12250.23090204475541345No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC11750.2214774715000905No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA11260.21224138970987397No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA11240.211864406779661No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC11140.2099794921285964No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG10630.20036642740816699No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG10270.1935807346643344No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT9990.1883029736413535No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA9890.1864180589902889No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA9720.1832137040834791No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9190.17322365643283674No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC8130.15324356113155196No Hit
GCCGTCCGTTATTTCCGCGGCCGCGGCTCCG7880.14853127450389048No Hit
CCTCGTCGTCCGCCGCCAGGCCGTCGCCCGT6800.1281741962723928No Hit
GAAGAGGAAGATGACGACTCCAGCGATACTG6520.1228964352494119No Hit
GTGGGCGGCTCTGATGCACAGAACACCTCTA6110.11516828518004704No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5840.11007901562217262No Hit
GTGCGTTATTTCCGTGGCCGCGGCAGCGGTT5820.1097020326919597No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTC5720.10781711804089512No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG5620.1059322033898305No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT5380.10140840822727548No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)