FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007951239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509707
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41930.8226294714414359No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10520.2063930846545172No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10060.19736829197950978No Hit
GAAATGGAGAACATCCTGCAGAACCTGACTC5860.11496801103379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)