FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences523877
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT67091.280644120661911No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41670.7954157178116237No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9850.1880212339919485No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA9460.18057673843287642No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG9450.18038585393136175No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6370.12159342746484385No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6200.11834839093909448No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6080.11605777692091845No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5870.11204920238911042No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5720.10918593486639039No Hit
TCCATCTCTAGCAGCGAGGAAATCGTCCCAA5710.10899505036487571No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5460.10422293782700902No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5410.10326851531943568No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5350.10212320831034766No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)