FastQCFastQC Report
Sun 21 May 2023
EGAF00007951279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences523238
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43160.8248636375798394No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC17290.33044236083770673No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA14180.27100478176279247No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13600.2599199599417473No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11530.22035861309767255No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11050.21118496745266974No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10950.20927379127662749No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10810.2065981446301683No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8770.1676101506389062No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG8720.16665456255088507No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA7250.13856027276306385No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7150.13664909658702157No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6590.12594651000118492No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6570.12556427476597648No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6250.11944851100264124No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5990.11447945294493138No Hit
AACGGTGACATGGCTACCGGCTGGGTGAAGG5980.11428833532732714No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5620.10740810109357501No Hit
ACCCTGTCCCTGTCTCAGCTGTACTCCCACA5500.1051146896823243No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG5390.1030123958886778No Hit
ACCCAGAACCCAGTGGAAAACTACATCGACT5250.10033674924221864No Hit

[OK]Adapter Content

Adapter graph