FastQCFastQC Report
Wed 31 May 2023
EGAF00007951321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450725
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42990.95379666093516No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15790.3503244772311276No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA14580.323478839647235No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14140.3137167896167286No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12740.2826557213378446No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11420.25336957124632536No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG11270.2500415996450163No Hit
GCTATCAACACCGTCACCACCAACGCCAATA10800.23961395529424814No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10010.22208663819402075No Hit
CACCCAGGTGTGCCGGTCTCTCCAGCCGTTA9320.20677796882799934No Hit
GGTGCCCCGCGTGGCTCTCCAGCAACCCCGA8150.18081979033778914No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC7580.1681734982528149No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7160.1588551777691497No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7020.1557490709412613No Hit
AGCGAACAGGCAGCGGAAGCGATGGAAGTTG6800.1508680459260081No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6520.1446558322702313No Hit
GCAGAAGCGATGGAAGTGGCGAACAAAACCC6210.1377780242941927No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6010.13334072882578069No Hit
ATGTCTTCTCGCCGCCGTAGCTCTTCCCGTC5700.1264629208497421No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5690.12624105607632147No Hit
GTGTCCCCGAACCGTCAATTCATTCCATACC5610.12446613788895669No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5590.12402240834211548No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5570.12357867879527427No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5560.12335681402185368No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC5200.11536968217871209No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5180.11492595263187089No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5080.11270730489766488No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA4910.10893560374951466No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG4760.10560763214820566No Hit
GCAGCCGAAGCGATGGAAGTCGCTTCCCAGG4560.10117033667979367No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)