FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007951325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462812
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45840.9904669714700569No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11680.2523702929051105No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7920.17112780135346534No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7580.16378140584081657No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5320.11494948272732773No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)