FastQCFastQC Report
Wed 31 May 2023
EGAF00007951359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440885
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG32320.7330709822289259No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20990.47608786871860015No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11340.25720993002710457No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT6630.15037935062431246No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6430.14584302028873744No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT5100.11567642355716343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)