FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007951361

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951361
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477809
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22310.4669229754985779No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG19870.4158565451885586No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC12580.26328512020493544No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT12250.25637859479415415No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6810.14252556984066855No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC6670.1395955287573068No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC5310.1111322725189354No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)