FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences482049
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5750.11928247958195122No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG5730.11886758400079658No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5370.11139946354001357No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT5210.10808029889077667No Hit
GAACCGATCTACGCTACCATCGACGACCTGGGT5200.10787285110019934No Hit
GTGAACGCAAAAATTGATCGCCTGAACCAGATC4890.10144196959230285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)