FastQCFastQC Report
Sun 21 May 2023
EGAF00007951385

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951385
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494766
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG30130.6089747476584891No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT12840.25951661997792896No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA10290.2079771043281066No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA8710.1760428161999814No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAGAA7320.14794872727713707No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC6900.13945986587598985No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6610.13359850919424537No Hit
GCAGCGGGTCGCCTGCCGGGCTATGGCGTCACC6520.1317794674654281No Hit
ATTGAGCAGAAACAGCTGCTGCAGGGTGATGTT5820.11763136513018276No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5680.11480174466313368No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT5570.11257847143902369No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAACAG5210.10530230452375468No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)