FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951400

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951400
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464547
Sequences flagged as poor quality0
Sequence length41
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAACGATGCCTTCCTCCACTGCAGCACGGGTCGCGTGCA5750.1237764962425761No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT5570.11990175375150415No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGG5010.10784699933483588No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)