FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007951407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences534760
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28020.5239733712319545No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14810.2769466676639988No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12710.23767671478794222No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8790.1643728027526367No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5800.10845986984815618No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)