FastQCFastQC Report
Sun 21 May 2023
EGAF00007951409

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951409
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences581059
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29870.5140613947981186No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29180.5021865249484132No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC15190.2614192362565591No Hit
CGTGTTCGTGGCCACTATCGTGCGCCATGGG13320.22923661796822697No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG13010.2239015315140115No Hit
CGTGTTCGTGGTCACTACCGTGCTCCGTGGG12290.2115103629751884No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC10340.17795094818254256No Hit
CGTGTCCGTGGCCACTACCGTGCCCCATGGG9470.16297828619813134No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8810.1516197150375435No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8360.1438752347007791No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG7910.13613075436401467No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7870.13544235611185781No Hit
ATCGAGAAATATGACCTGGTGGCTGTTCCGG7650.13165616572499522No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7080.12184649063176028No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7060.12150229150568186No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC6730.11582300592538795No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6590.11341361204283901No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6490.11169261641244693No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6330.10893902340381957No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC6120.10532493257999617No Hit

[OK]Adapter Content

Adapter graph