FastQCFastQC Report
Sun 21 May 2023
EGAF00007951427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences572931
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23140.4038880772728304No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19860.34663860045974126No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14520.2534336595506265No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8270.14434547964763644No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6970.12165513822781451No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5790.10105928986213No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)