FastQCFastQC Report
Sun 21 May 2023
EGAF00007951429

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951429
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500784
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG85431.7059251094284162No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14640.2923416083580945No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14620.29194223457618457No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6610.1319930349212435No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6230.12440493306495415No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6080.1214096297006294No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5350.10683248666091569No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)