FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433791
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61451.416580795821029No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11600.26740988171723246No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7850.18096272167933405No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC7310.1685143306338767No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6660.15353015622730762No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6300.14523122886366938No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5850.13485756965912155No Hit
GCCCTGATGCAGGCATACGGCGGCGGTGGTT5770.13301336357831306No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5760.132782837818212No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5010.11549340581063232No Hit
TGGCGCCCTGCCCCGTGGACCCCGAACCCGC4560.10511974660608449No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)