FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951465

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951465
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433639
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33600.7748380565401175No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13280.3062455175849036No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8950.20639287517958488No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7780.17941190713934863No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5740.13236816799227008No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5340.12314390541441152No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)