FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463852
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48031.0354595862473375No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT35490.76511473487233No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA33980.7325612479842708No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA24240.5225804782559955No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT19610.4227641575330062No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT19580.4221173995153627No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA14790.31885170269827445No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA13050.2813397376749481No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG11180.2410251545751662No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA10540.22722765019877028No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG9380.2022196735165527No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG8950.19294947526366168No Hit
TCTGCCTGCAACGATTTCAGCGTTCGTATGC8930.1925183032518993No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8160.17591818079904797No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG7710.1662168105343946No Hit
GTGGGCGGCTCTGATGCACAGAACACCTCTA5840.12590222743461277No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5800.12503988341108802No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5240.11296706708174159No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC5090.10973327699352378No Hit
ATTGAGCAGAAACAGCTGCTGCAGGGTGATG4840.10434362684649415No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG4720.1017565947759199No Hit

[OK]Adapter Content

Adapter graph