FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007951473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences442869
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50381.1375824453732368No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12580.28405691073432554No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6210.1402220521192497No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5900.13322223953358667No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5450.12306122126407584No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4950.11177120096461934No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)