FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455623
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49271.0813764888954245No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA15030.32987799123398076No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9320.20455508172326684No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8250.1810707536713467No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6060.13300469906040738No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5340.11720216055818077No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG5090.11171516802268543No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)