FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007951491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences492041
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42350.8607006326708546No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22100.4491495627396904No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11390.2314847746427635No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10800.21949390396328763No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9880.20079627510715573No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9550.1940895169304997No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9410.19124422558282744No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6160.12519281929757886No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5810.11807959092839825No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA5620.11421812409941447No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5120.10405636928629931No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5010.10182078322741397No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)