FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007951513

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951513
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences453133
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23720.5234666201755335No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8410.18559672325785145No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8260.18228643687394208No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7560.16683843374903173No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT6520.14388711482059352No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6080.13417694142779274No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5960.13152871232066524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)