FastQCFastQC Report
Wed 31 May 2023
EGAF00007951515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469366
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48761.0388481483533105No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15790.33641124410374845No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9010.1919610708913726No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8020.1708687889621319No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7660.16319886826058982No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6550.13954994609750174No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5670.12080125104928777No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5640.12016209099082592No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC5370.11440965046466936No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5260.11206606358364261No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)