FastQCFastQC Report
Wed 31 May 2023
EGAF00007951560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472793
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT9520.2013566190700793No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT6970.14742181039059377No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC6430.13600032149376154No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)