FastQCFastQC Report
Wed 31 May 2023
EGAF00007951561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472793
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG69811.476544703496033No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9420.1992415285336289No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8050.17026478818425822No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7160.15144048240984956No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6630.14023050256666236No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5070.10723509019803593No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)