FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007951581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506640
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30410.6002289594189167No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG23150.4569319437865151No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG16740.3304121269540502No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG14410.28442286436128217No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12250.2417890415285015No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC11730.23152534343912837No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6690.13204642349597348No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG6570.1296778777830412No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5310.10480814779725248No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)