FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007951587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463430
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45650.9850462853073819No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14630.3156895323997152No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8290.17888354228254535No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5350.1154435405562868No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4910.1059491185292277No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4690.10120190751569816No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)