FastQCFastQC Report
Sun 21 May 2023
EGAF00007951597

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951597
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496975
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50801.0221842144977111No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16610.3342220433623422No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16300.32798430504552545No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12230.2460888374666734No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7420.1493032848734846No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5950.11972433220986971No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5270.1060415513858846No Hit
ATCGAAACCGTCGGTGACATCGTGTCCGGTC5260.105840334020826No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5170.10402937773529856No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)