FastQCFastQC Report
Wed 31 May 2023
EGAF00007951605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007951605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448950
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21250.47332665107472993No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10630.23677469651408845No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10510.23410179307272524No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6260.13943646285777928No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4880.1086980732821027No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4640.10335226639937632No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)