FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20897278
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG669120.3201948119750333No Hit
TCGCCTCCTTGTCACA410260.19632221957328605No Hit
TGGACCTCTTACAGCT267310.12791618123661846No Hit
TTTCGCTCTAGTCTGT261040.12491579046802172No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)