FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953474

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953474
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21958632
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG530730.24169538430262866No Hit
CAATCAGACTATTGCG352540.16054734192913295No Hit
CTCTGCAACCCTCCTA297310.13539550186915106No Hit
TGGGAGTGAGCGCAAA284190.12942063057480083No Hit
CATTGCGCTCGTGCAC267270.1217152325336114No Hit
CCGTTCTGAAATGCTC253470.11543068803193204No Hit
GAGAGAAGACCAGAGA239570.1091006033527043No Hit
TGGCTAATGCTTGTGA239170.1089184426425107No Hit
GGGAGCTCTAGTGGTG232710.10597654717288399No Hit
ATCCCGACTCGTTCTC228200.10392268516545111No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)