FastQCFastQC Report
Wed 31 May 2023
EGAF00007953478

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953478
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22606408
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG750370.3319280090848577No Hit
CAATCAGACTATTGCG364940.16143210367609043No Hit
CTCTGCAACCCTCCTA304910.13487768600832117No Hit
TGGGAGTGAGCGCAAA296280.1310601843512689No Hit
CATTGCGCTCGTGCAC283840.1255573198537335No Hit
CCGTTCTGAAATGCTC264480.11699337639133117No Hit
TGGCTAATGCTTGTGA254240.11246368728725059No Hit
GAGAGAAGACCAGAGA246590.10907969103273728No Hit
GGGAGCTCTAGTGGTG240760.10650077624008202No Hit
ATCCCGACTCGTTCTC237890.10523122470407506No Hit
CCTAACGCTTCGTCCT227020.10042285355550515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)